Используйте пакет tabulate:
pip install tabulate
И рассмотрим следующий пример использования:
import pandas as pd
from io import StringIO
from tabulate import tabulate
c = """Chromosome Start End
chr1 3 6
chr1 5 7
chr1 8 9"""
df = pd.read_table(StringIO(c), sep="\s+", header=0)
print(tabulate(df, headers='keys', tablefmt='psql'))
+----+--------------+---------+-------+
| | Chromosome | Start | End |
|----+--------------+---------+-------|
| 0 | chr1 | 3 | 6 |
| 1 | chr1 | 5 | 7 |
| 2 | chr1 | 8 | 9 |
+----+--------------+---------+-------+