For a set of observations:
[a1,a2,a3,a4,a5]
their pairwise distances
d=[[0,a12,a13,a14,a15]
[a21,0,a23,a24,a25]
[a31,a32,0,a34,a35]
[a41,a42,a43,0,a45]
[a51,a52,a53,a54,0]]
Are given in a condensed matrix form (upper triangular of the above, calculated from scipy.spatial.distance.pdist
):
c=[a12,a13,a14,a15,a23,a24,a25,a34,a35,a45]
The question is, given that I have the index in the condensed matrix is there a function (in python preferably) f to quickly give which two observations were used to calculate them?
f(c,0)=(1,2)
f(c,5)=(2,4)
f(c,9)=(4,5)
...
I have tried some solutions but none worth mentioning :(